Microbiology

 

 

 

  1. What are the advantages and disadvantages of the different types of light and electron microscopes discussed in Chapter 3 that are used to study microorganisms? Focus your response in terms of the following parameters:
    • Range of magnification
    • Resolving ability
    • Sample preparation
    • Possible states of sample (e.g. whole organism, part of, living, non-living, etc.)
  2. What type of microscope would you use to investigate each of the following scenarios and why (your answer to question 1 will help):
    • Determine the relative sizes of two eukaryotic cells.
    • Determine how many bacteria are dying after a chemical treatment.
    • Determine where in a eukaryotic cell a particular protein is localized.
    • Identify a virus from a contaminated sample.
    • Visualize the sensory hairs on the surface of an ant’s antennae.
  3. What are advantages and disadvantages of the differential staining techniques discussed in Chapter 3 that are used to study microorganisms? Focus your response in terms of the following parameters:
    • Ease and cost of sample preparation
    • Why you would use it (i.e. what information is imparted)
    • Specificity of identification
    • Chance of false positives or negatives

 

 

 

In this activity you have the opportunity to apply your understanding of microbial growth and how to control it to solve the case studies.

  1. Explain why is each of these is often resistant to disinfectants.
    1. Mycobacterium
    2. Pseudomonas
    3. Bacillus
  2. Entamoeba histolytica and Giardia lamblia were isolated from the stool sample of a 45- year- old man, and Shigella sonnei was isolated from the stool sample of an 18- year- old woman. Both patients experienced diarrhea and severe abdominal cramps, and prior to onset of digestive symptoms both had been treated by the same chiropractor. The chiropractor had administered colonic irrigations (enemas) to these patients. The device used for this treatment was a gravity- dependent apparatus using 12 liters of tap water. There were no check valves to prevent backflow, so all parts of the apparatus could have become contaminated with feces during each colonic treatment. The chiropractor provided colonic treatment to four or five patients per day. Between patients, the adaptor piece that is inserted into the rectum was placed in a “hot- water sterilizer.” What two errors were made by the chiropractor?
  3. Between March 9 and April 12, five chronic peritoneal dialysis patients at one hospital became infected with Pseudomonas aeruginosa. Four patients developed peritonitis (inflammation of the abdominal cavity), and one developed a skin infection at the catheter insertion site. All patients with peritonitis had low- grade fever, cloudy peritoneal fluid, and abdominal pain. All patients had permanent indwelling peritoneal catheters, which the nurse wiped with gauze that had been soaked with an iodophor solution each time the catheter was connected to or disconnected from the machine tubing. Aliquots of the iodophor were transferred from stock bottles to small in- use bottles. Cultures from the dialysate concentrate and the internal areas of the dialysis machines were negative; iodophor from a small in- use plastic container yielded a pure culture of P. aeruginosa. What improper technique led to this infection?
  4. Eleven patients received injections of methylprednisolone and lidocaine to relieve the pain and inflammation of arthritis at the same orthopedic surgery office. All of them developed septic arthritis caused by Serratia marcescens. Unopened bottles of methylprednisolone from the same lot numbers tested sterile; the methylprednisolone was preserved with a quat. Cotton balls were used to wipe multiple- use injection vials before the medication was drawn into a disposable syringe. The site of injection on each patient was also wiped with a cotton ball. The cotton balls were soaked in benzalkonium chloride, and fresh cotton balls were added as the jar was emptied. Opened methylprednisolone containers and the jar of cotton balls contained S. marcescens. How was the infection transmitted? What part of the routine procedure caused the contamination?

.

In this activity you have the opportunity to apply your understanding of microbial metabolism and enzyme specificity to specific health-related analyses.

Using what you’ve learned from reading and videos, compose answers to the following questions and post them on the discussion board. Please number your answers so we can reference them easily. Please respond thoughtfully and in your own words, being sure to back up each statement of fact with cited sources. Your response to each question should be at least 125 words.

  1. Haemophilus influenzae requires hemin (X factor) to synthesize cytochromes and NAD (V factor) from other cells. For what does it use these two growth factors? What disease(s) does H. influenzae cause?
  2. The bacterial enzyme streptokinase is used to digest fibrin (blood clots) in patients with atherosclerosis. Why doesn’t injection of streptokinase cause a streptococcal infection? How do we know the streptokinase will digest fibrin only and not other tissues?
  3. Based on biochemical tests and oxygen usage, how would you identify and classify, respectively, the following microbes:
    1. Staphylococcus aureus
    2. Pseudomonas aeruginosa
    3. Bacillus subtilis
    4. Escherichia coli

In addition, thoughtfully and objectively critique responses from two of your peers. Be specific in your critique. If you find something your peer said to be interesting, then state specifically why. If you find an error in something your peer said, then politely point out the error and cite the sources supporting your statement. Be sure to focus your critique on the facts presented and not on the person or anything in the response that may be interpreted as opinion. Note: opinion is not asked for in any of these questions.

 

 
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BIO LABS / Natural Science Guru

Biology LabPaq / Published by: Hands-On Labs, Inc.

[email protected] / www.HOLscience.com / Toll Free 866.206.0773

 

 

A laboratory Manual of Small-Scale Experiments for the independent Study of

general Biology

LabPaq® is a registered trademark of Hands-On Labs, Inc. (HOL). The LabPaq referenced in this manual is produced by Hands-On Labs, Inc. which holds and reserves all copyrights on the intellectual properties associated with the LabPaq’s unique design, assembly, and learning experiences. The laboratory manual included with a LabPaq is intended for the sole use by that LabPaq’s original purchaser and may not be reused without a LabPaq or by others without the specific written consent of HOL. No portion of any LabPaq manual’s materials may be reproduced, transmitted or distributed to others in any manner, nor may be downloaded to any public or privately shared systems or servers without the express written consent of HOL. No changes may be made in any LabPaq materials without the express written consent of HOL. HOL has invested years of research and development into these materials, reserves all rights related to them, and retains the right to impose substantial penalties for any misuse.

Published by: Hands-On Labs, Inc. 3880 S. Windermere St. Englewood, CO 80110

Phone: Denver Area: 303-679-6252 Toll-free, Long-distance: 866-206-0773

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Printed in the United States of America.

The experiments in this manual have been and may be conducted in a regular formal laboratory or classroom setting with the users providing their own equipment and supplies. However, this manual was especially written for the benefit of the independent study of students who do not have convenient access to such facilities. It allows them to perform college and advanced high school level experiments at home or elsewhere by using a LabPaq, a collection of experimental equipment and supplies specifically packaged to accompany this manual.

Use of this manual and authorization to perform any of its experiments is expressly conditioned upon the user reading, understanding and agreeing to fully abide by all the safety precautions contained herein.

Although the author and publisher have exhaustively researched many sources to ensure the accuracy and completeness of the information contained in this manual, we assume no responsibility for errors, inaccuracies, omissions or any other inconsistency herein. Any slight of people, organizations, materials, or products is unintentional.

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Table of Contents 5 To the instructor

6 To the Student

7 How to Perform an Experiment

9 Safety Concerns

11 Science lab Safety Reinforcement Agreement

Experiments 14 Research and The Scientific Method

37 Microscopy and the Metric System

75 Basic Chemistry for Investigating Living Systems

105 Cell Structure and Function: Cell Types and Transport

131 Cell Structure and Function: Tonicity and pH

153 Enzymes

183 Photosynthesis and Respiration

215 Mitosis and Meiosis

238 Genetic Inheritance

266 Human Genetics

285 The Properties of Water

APPENDiX 321 laboratory Equipment and Techniques

323 Potential Laboratory Hazards

326 Material Safety Data Sheets

328 How to Write Lab Notes and Lab Reports

334 laboratory Drawings

336 Final Cleanup Instructions

338 Using Statistics

342 The T-Test

348 The Chi-Square Test

351 Preparing a Water Bath

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To the instructor As an increasing number of students embrace online and independent-study courses, laboratory experiences must remain an integral part of science education. This lab manual’s author and publisher are science educators who welcome electronic technology as an effective tool to expand and enhance instruction. However, technology can neither duplicate nor replace learning experiences afforded to students through traditional hands-on laboratory and field activities. This does not mean that some experiments cannot or should not be replaced or reinforced by computer simulations; but any course of science study must also provide sufficient hands-on laboratory and field experiences to:

● Engage students in open-ended, investigative processes by using scientific problem solving.

● Provide application of concepts students have seen in their study materials, which reinforce and clarify scientific principles and concepts.

● Involve multiple senses in three-dimensional rather than two-dimensional learning experiences that are important for greater retention of concepts and for accommodation of different learning styles.

● Stimulate students to understand the nature of science including its unpredictability and complexity.

● Provide opportunities to engage in collaborative work and to model scientific attitudes and behavior.

● Develop mastery of techniques and skills needed for potential science, engineering, and technology careers.

The knowledge gained from science courses with strong laboratory components enables students to understand, in practical and concrete ways, their own physical makeup, the functioning of the natural world around them, and contemporary scientific and environmental issues. It is only by maintaining hands-on laboratory experiences in our curricula that the brightest and most promising students will be stimulated to learn scientific concepts and avoid being turned-off by lecture- and textbook-only approaches. Physical experimentation may offer some students their only opportunity to experience a science laboratory environment. All students – as potential voters, parents, teachers, leaders, and informed citizens – will benefit from a well-rounded education that includes science laboratory experiences when it is time for them to make sound decisions affecting the future of their country and the world.

This lab manual can be used by all students, regardless of the laboratory facilities available to them. The experiments are based on the principles of micro-scale science which have been successfully used in campus laboratories for decades. LabPaq’s micro-scale experiments can also be performed at home, in a dorm room, or at a small learning center that lacks a formal laboratory.

Introduction

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To the Student Science is a way of learning about our natural world and how it works by testing ideas and making observations. Learning about the characteristics of the natural world and how those characteristics change and interact with each other makes it easier to understand ourselves and our physical environment. Also, it helps us make the multitude of personal and global decisions that affect our lives and our planet. Science credits are impressive on an academic transcript and your science knowledge may create some unique job opportunities.

What are Micro-Scale Experiments?

You may be among the growing number of students to take a full-credit, laboratory science course through independent study, due to the development and perfection of micro-scale and small- scale experimentation techniques over the past half century. While experimentation on any scale is foundational to fully understanding science concepts, science courses in the past have required experimentation to be performed in the campus laboratory due to the potential hazards inherent in traditional experimentation.

Potential hazards, increasing chemical, specimen, and science equipment costs, and environmental concerns made high schools, colleges, and universities reexamine the traditional laboratory methods used to teach science. Scientists began to scale down the quantities of materials and the size of equipment used in experiments and found reaction results remained unchanged.

Over time, more and more traditional science experiments were redesigned to be performed on micro and small scales. Educational institutions eventually recognized that the scientific reaction, not the size of the reaction, facilitates learning. Successive comparative assessments have proven that students’ learning is not impaired by studying small-sized reactions. Many assessments even suggest that science learning is enhanced by small-scale experimentation.

In the mid-1990s, Dr. Peter Jeschofnig of Colorado Mountain College, pioneered the development of LabPaqs: academically aligned, small-scale experiments that can be performed at home. Hands-On Labs, Inc. has subsequently proven that students can perform LabPaq’s rigorous science experiments at home and still achieve an equivalent, if not higher, level of learning than their campus-based peers.

Introduction

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How to Perform an Experiment

Although each experiment is different, the process of preparing, performing, and recording an experiment is essentially the same.

Choose the Right Place for Your Home Laboratory: The best place to perform at-home experiments will be determined by the nature of the individual experiments. However, this place is usually an uncluttered room where a door can be closed to keep out children and pets; a window or door can be opened for fresh air, ventilation, and fume exhaust; there is a source of running water for fire suppression and cleanup; and there is a counter or tabletop work surface. A kitchen usually meets all these requirements. Sometimes the bathroom works too, but it can be cramped and subject to interruptions.

Review each experiment before starting any work to help you select the most appropriate work area. Because some of the equipment and supplies in your LabPaq may pose dangers to small children and animals, always keep safety in mind when selecting a work area, and always choose an area where you cannot be disturbed by children or pets.

Use a Lab Partner: While the experiments in the LabPaq can be performed independently, it is often fun and useful to have a lab partner to discuss ideas with, help take measurements, and reinforce your learning process. Whether your partner is a parent, spouse, sibling, or friend, you will have to explain what you are doing, and in the process of teaching another, you will better teach yourself. Always review your experiments several days ahead of time so you have time to line up a partner if needed.

Read the Entire Experiment before You Start: Knowing what you are going to do before you do it will help you organize your work and be more effective and efficient.

Review Basic Safety: Before beginning work on any experiment, reread the lab manual’s safety sections, try to foresee any potential hazards, and take appropriate steps to prevent safety problems.

Organize Your Work Space, Equipment, and Materials: It is hard to organize your thoughts in a disorganized environment. Assemble all required equipment and supplies before you begin working.

Outline Your Lab Notes: Outline the information needed for your Lab Notes and set up any required data tables before the experiment, to make it easier to enter observations and results as they occur. LabPaq CDs normally include a Report Assistant containing .rtf files of each experiment’s questions and data tables. These files can be copied and pasted into your Lab Notes to facilitate your compilation of data and text information.

Perform the Experiment According to Instructions: Follow all directions precisely in sequential order. This is not the time to be creative. Do not attempt to improvise your own procedures!

Introduction

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Think About What You Are Doing: Stop and give yourself time to reflect on what has happened in your experiment. What changes occurred? Why? What do they mean? How do they relate to the real world of science? This step can be the most fun and often creates “light bulb” experiences of understanding.

Cleanup: Always clean your laboratory space and laboratory equipment immediately after use. Wipe down all work surfaces that may have been exposed to chemicals or dissection specimens. Blot any unused chemicals with a paper towel or flush them down the sink with generous amounts of water. Wrap dissection specimens in newspaper and plastic and place them in a sealed garbage can. Discard used pipets and other waste in your normal trash. Return cleaned equipment and supplies to their LabPaq box and store the box out of reach of children and pets.

Complete Your Work: Complete your Lab Notes, answer the required questions, and prepare your Lab Report. If you have properly followed all the above steps, the conclusion will be easy.

NOTE: The Appendix section of this manual contains valuable information regarding equipment and techniques specific to the discipline you are studying. Please take the time to review this section before beginning experimentation.

Introduction

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Safety Concerns CAUTION for Women:

If you are pregnant or could be pregnant, you should seek advice from your personal physician before doing any type of science experimentation.

You, as a responsible science student and researcher, are solely responsible for safely storing and using your LabPaq materials and for conducting your experiments in a safe and responsible manner.

Items in your LabPaq can be especially dangerous to children and pets, so the LabPaq should always be kept safely stored out of their reach. The LabPaq may contain acids or other chemicals that can cause burns if mishandled plus serious illness and/or death if consumed.

Many LabPaq items are made of glass and/or have sharp edges that pose potential risks for cuts and scratches. While LabPaq thermometers do not contain mercury, they might still break and cause injury. LabPaqs contain small items and materials that could cause choking, injury, or death if misused.

Experimentation may require you to climb, push, pull, spin, and whirl. While these activities are not necessarily dangerous, they can pose hazards which means you should always undertake these activities cautiously and with consideration for your surroundings. If you need to climb to take measurements, make sure any stool, chair, or ladder you use is sturdy and take ample precautions to prevent falls. It is wise to have a partner help keep you stable when you must climb. Be especially aware of experimental equipment that you must put in motion, and act cautiously to ensure that items cannot go astray and cause injury to people or property.

If you or anyone accidentally consumes or otherwise comes into contact with a substance that could be toxic or cannot be easily washed away, immediately call:

The National Poison Control Center: 1-800-222-1222

Your eyesight is precious and should be protected against chemical spills or splashes as well as flying objects and debris. Always wear safety goggles when working with chemicals of any kind and when working with non-chemical objects that could possibly fly into your eyes.

Since chemicals, dirt, and germs are often involved in laboratory experiments, you should never eat or smoke in your laboratory area. Protect your body by keeping your hair tied back from your face and by wearing old clothing that fully covers your arms, legs, and feet.

You also need to protect your home furnishings from damage during your experimentation. Cover your work surface with plastic or paper towels when appropriate to prevent ruining furniture and to aid in cleanup.

Introduction

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The best safety tools you have are your own mind and intellectual ability to think and plan. After previewing each experiment, carefully think about what safety precautions you need to take to experiment safely, and then take them!

Since it is impossible to control students’ use of this lab manual and related LabPaqs or students’ work environments, the author(s) of this lab manual, the instructors and institutions that adopt it, and Hands-On Labs, Inc. – the publisher of the lab manual and the producer of LabPaqs – authorize the use of these educational products only on the express condition that the purchasers and users accept full and complete responsibility for all and any liability related to their use of same. Additional terms authorizing the use of a LabPaq are contained in its Purchase Agreement available at www.HOLscience.com.

 

Introduction

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Science lab Safety Reinforcement Agreement Any type of science experimentation involves potential hazards, and unforeseen risks may exist. The need to prevent injuries and accidents cannot be overemphasized!

Use of this lab manual and any LabPaqs are expressly conditioned upon your agreement to follow all safety precautions and accept full responsibility for your actions.

Study the safety section of this lab manual until you can honestly state the following:

 Before beginning an experiment, I will first read all directions and then assemble and organize all required equipment and supplies.

 I will select a work area that is inaccessible to children and pets while experiments are in progress. I will not leave experiments unattended and I will not leave my work area while a chemical equipment is set up unless the room is locked.

 To avoid the potential for accidents, I will clear my home laboratory workspace of all non- laboratory items before setting up equipment and supplies for my experiments.

 I will never attempt an experiment until I fully understand it. If in doubt about any part of an experiment, I will first speak with my instructor before proceeding.

 I will wear safety goggles when working with chemicals or items that can get into my eyes.

 I know that except for water, most solvents, such as toluene, alcohols, acetone, ethers, and ethyl acetate are highly flammable and should never be used near an open flame.

 I know that the heat created when water is added to concentrated acids is sufficient to cause spattering. When preparing dilute acid solutions, I will always add the acid to the water – rather than the water to the acid – while slowly stirring the mixture.

 I know it is wise to wear rubber gloves and goggles when handling acids and other dangerous chemicals; I should neutralize acid spills with sodium bicarbonate; and I should wash acid spilled on skin or clothes immediately with plenty of cold water.

 I know that many chemicals produce toxic fumes and that cautious procedures should be used when smelling any chemical. When I wish to smell a chemical, I will never hold it directly under my nose, but will use my hand to waft vapors toward my nose.

 I will always handle glassware with respect and promptly replace any defective glassware. Even a small crack can cause glass to break, especially when heated. To avoid cuts and injuries, I will immediately dispose of any broken glassware.

Introduction

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 I will avoid burns by testing glass and metal objects for heat before handling. I know that the preferred first aid for burns is to immediately hold the burned area under cold water for several minutes.

 I know that serious accidents can occur when wrong chemicals are used in an experiment. I will always read labels before removing chemicals from their containers.

 I will avoid the possibility of contamination and accidents by never returning an unused chemical to its original container. To avoid waste I will try to pour only the approximate amount of chemicals required.

 I know to immediately flush any chemical spill on the skin with cold water and consult a doctor if required.

 To protect myself from potential hazards, I will wear long pants, a long-sleeved shirt, and enclosed shoes when performing experiments. I will tie up any loose hair, clothing, or other materials as well.

 I will never eat, drink, or smoke while performing experiments.

 After completing all experiments, I will clean my work area, wash my hands, and store the laboratory equipment in a safe place inaccessible to children and pets.

 I will always conscientiously work in a reasonable and prudent manner to optimize my safety and the safety of others whenever and wherever I am involved with any type of science equipment or experimentation.

I am a responsible adult who has read, understands, and agrees to fully abide by all safety precautions prescribed in this lab manual for laboratory work and for the use of a LabPaq. Accordingly, I recognize the inherent hazards associated with science experimentation; I will always experiment in a safe and prudent manner; and I unconditionally accept full and complete responsibility for any and all liability related to my purchase and/or use of a science LabPaq or any other science products or materials provided by Hands-On Labs, Inc. (HOL).

____________________________________________________ ____________ Student’s Name (print) and Signature Date

Introduction

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LabPaq by Hands-On Labs

ExpErimEnts

 

 

Research and The Scientific Method Margaret E. Vorndam, M.S. Version 42-0116-00-01

Review the safety materials and wear goggles when working with chemicals. Read the entire exercise before you begin. Take time to organize the materials you will need and set aside a safe work space in which to complete the exercise.

Experiment Summary:

Students will use the scientific method, controls, double-blind experimentation, and statistics to determine the validity of data. Students will investigate whether a subject’s dominant hand can be used to predict which thumb will be placed on top when hands are clasped. They will learn how to write a formal lab report.

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ExpErimEnt

 

 

Objectives ● To outline an approach to explore a scientific problem

● To explain the rationale of the scientific method

● To use simple statistics to compare data results

● To write a laboratory report

Time Allocation: Four to eight hours total.

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Experiment Research and The Scientific Method

 

 

materials

MATERIALS FROM: QTy ITEM DESCRIPTION: Student Provides 1 Paper 1 Pen or pencil 1 Computer with word processing and spreadsheet programs 1 Calculator 50 Volunteers

Note: The packaging and/or materials in this LabPaq may differ slightly from that which is listed above. For an exact listing of materials, refer to the Contents List form included in the LabPaq.

Safety Issues: None

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Experiment Research and The Scientific Method

 

 

Discussion and review Science begins with observation and inquiry based on that observation. While there are questions that we will possibly never be able to answer satisfactorily such as “How did the universe begin?” most questions do have answers that can be researched. Theoretically, all questions that we pose could be considered to be scientific because we are biological creatures, and the world/ universe around us provides the items that we require to live – shelter, food, water, and air. Although questions about how the stock market functions may seem to be far removed from scientific inquiry, those questions are generated by the barter system that provides shelter, food, water, and air for us. Other animals may use systems that supply their needs in a parallel, though through a much less complex way.

The acquisition of new scientific knowledge depends on free and ready access to prior scientific knowledge of a chosen research topic. A scientist is interested in exploring a scientific problem or an area where knowledge is incomplete – the unknown. She first explores the literature to discover what is already known about the subject (background information), and then poses a hypothesis regarding the problem. She then plans and conducts a research project that is capable of supporting or refuting her hypothesis. If she is able to support the hypothesis, she can follow up with more research to explore further. Finally, she will seek to publicize her research findings at a scientific conference and/or submit a publication to a scientific journal. Not only will she be publicly credited with the new information, but she will make her findings available for other scientists to test, critique, and use in further research on the topic. Thus, the cycle of information continues with past research informing new research efforts. The overall result is the total body of knowledge that comprises all of science.

Over time, scientists have developed a global approach to research that has informed investigative methodology. This method had its roots in the inquiry-driven teachings of Socrates and developed more formally as a logical approach to critical thinking-driven research during the Age of Enlightenment. Although today scientists and theoreticians argue about variations applicable to specific problems, the scientific method has been accepted as the basis of scientific inquiry.

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Experiment Research and The Scientific Method

 

 

Exercise 1: The Scientific Method Search Key Words: Scientific method, scientific research.

For this laboratory, a simple research project will be conducted, followed by the construction of a formal laboratory report. We will first illustrate the step-by-step process involved in the formulation and conduct of a simple exercise. Then, we will look at the process involved in the construction of a formal laboratory report which is a way to present research in an organized manner and is similar to the format that one would use to author a research article that could be submitted to a scientific journal.

First, let us look at a simple example of a biological research study about the eating habits of a common toad.

A. Make an Observation and Pose a Question: The scientific method process begins with an idea: Propose a problem and formulate a statement about the problem. For instance, this problem might be of interest: “It is generally believed that toads of genus and species Bufo bufo eat insects and minnows. This researcher is interested in investigating whether B. bufo prefers insects over minnows, if presented with a choice.”

B. Research Existing Information: All scientific research builds on past research. So, the question would be researched in the scientific literature to find out what is already known about it. Literature research can be done online, but library services such as Biological Abstracts1 or EBSCO2 should also be used to be as comprehensive as possible. Use search terms such as “B. bufo diet” or a similar descriptor. The research may or may not indicate that there is existing information on the question. Whatever the case, summarize the findings of this preliminary research in the background section of the final report and provide references to the existing literature in the reference section at the end of the report.

C. Formulate a Testable Hypothesis: The literature search may indicate that there is little existing information on the problem or that someone else has already answered all or part of the problem. If so, revise the initial question based on pre-existing knowledge.

Now, formulate a testable hypothesis (H1). Do not attempt to “prove” a hypothesis. Rather, attempt to either support or reject the hypothesis. Either outcome is viable, though there may not be much interest in a journal article that presents a rejected hypothesis! There are actually a minimum of two hypotheses to test:

1 Biological Abstracts, BIOSIS, http://www.biosis.org, May 2002. Two Commerce Square, 2001 Market Street, Suite 700, Philadelphia, PA 19103-7095 USA phone: 1-800-523-4806 (USA and Canada). E-mail: [email protected] 2 EBSCO Information Services, http://www-us.ebsco.com/home/default.asp, May 2002. Suite 120, 2801 Youngfield St., Golden, CO 80401-2264, Phone: (303) 237-1753/(800) 727-1077. E-mail: [email protected]

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Experiment Research and The Scientific Method

 

 

H1= “When given a choice, B. bufo has a food preference for either insects or minnows (amount of insects consumed ¹ amount of minnows consumed).”

Ho is the “null” hypothesis, or the hypothesis that is accepted if the H1 hypothesis is rejected. Generally, this hypothesis is understood as the equal assumption, so it is not included it in the report.

Ho = “When given a choice, B. bufo has NO food preference for either insects or minnows (amount of insects consumed ≈ amount of minnows consumed).”

H1 is the alternate hypothesis that will be tested. For testing purposes, the condition to be tested is never equal to another condition, but it can be ‘greater or less than’ or ‘not equal to’ or ‘greater than’ or ‘less than.’ At this point, a scientist might wish to identify grant sources and obtain financial support from an interested person or group that is willing to fund the research project!

 
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Cervical Cancer

Question 3

1 / 1 point

You woke up this morning with the worst headache of your life, and you feel nauseous. Your neck feels so stiff that you can hardly nod your head. Your roommate says your skin is very hot and you probably have a fever. Which of the following statements is TRUE?

 

You   studied so much last night that you developed a tension headache. Your   roommate should let you rest.

 

You   are experiencing an aura associated with a migraine headache and your   roommate should allow you to turn off all the lights.

 

Correct Response

You   have signs of meningitis. Both you and your roommate should go to the health   clinic immediately.

 

You   drank too much and your roommate should make you quit whining and get out of   bed.

 
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Bacterial Morphology

Lab 1: Observing Bacteria and Blood
Lab 2: Bacterial Morphology
Lab 3: Aseptic Technique and Culturing Microbes
Lab 4: Isolation of Individual Colonies
Lab 5: Differential Staining
Lab 6: Methyl Red Voges-Proskauer Test
Lab 7: Antibiotic Sensitivity

 

(1) Remember to answer all of the questions
(2) Write up your lab report using the simple example
(3) Include pictures of you actually doing the experiment. You can use a smart phone to shoot a photo right through the eye piece on the microscope, of the culture, the bacteria on a plate, any color changes or even your set up and homemade incubator.
(4) Include one or two references which can be found by “Googling” on the Internet.

MicroBiology LabPaq / Published by: Hands-On Labs, Inc.

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A laboratory Manual of Small-Scale Experiments for the independent Study of

Microbiology

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The experiments in this manual have been and may be conducted in a regular formal laboratory or classroom setting with the users providing their own equipment and supplies. However, this manual was especially written for the benefit of the independent study of students who do not have convenient access to such facilities. It allows them to perform college and advanced high school level experiments at home or elsewhere by using a LabPaq, a collection of experimental equipment and supplies specifically packaged to accompany this manual.

Use of this manual and authorization to perform any of its experiments is expressly conditioned upon the user reading, understanding and agreeing to fully abide by all the safety precautions contained herein.

Although the author and publisher have exhaustively researched many sources to ensure the accuracy and completeness of the information contained in this manual, we assume no responsibility for errors, inaccuracies, omissions or any other inconsistency herein. Any slight of people, organizations, materials, or products is unintentional.

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Table of contents 5 Important Information to Help Students with the Study of Microbiology

Experiments 49 observing Bacteria and Blood

73 Bacterial Morphology

86 Aseptic Technique & Culturing Microbes

105 Isolation of Individual Colonies

129 Differential Staining

141 Methyl red Voges-Proskauer Test

153 Antibiotic Sensitivity

167 Microbes in the Environment

Appendix 178 Preparation of Cultures

181 Preparation of Disinfecting Solution

183 Final Cleanup Instructions

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Important Information to Help Students with the Study of Microbiology

Welcome to the study of microbiology. Do not be afraid of taking this course. By the end of the semester you will be really proud of yourself and will wonder why you were ever afraid of the m-word, microbiology! After their first microbiology class, most students say they thoroughly enjoyed it, learned a lot of useful information for their lives, and only regret not having studied it sooner.

Microbiology is not some “mystery” science only comprehendible by eggheads. Microbiology is simply the study of microscopic living organisms. It will be easier for you to understand the world we live in and to make the multitude of personal and global decisions that affect our lives and our planet after you have learned about the characteristics of life around you and how organisms change and interact with each other, with the environment, and with you. Plus, having microbiology credits on your transcript will certainly be impressive, and your microbiology knowledge may create some unique job opportunities for you.

This lab manual of microbiology experiments was designed to accompany any entry level college or advanced high school level microbiology course. It can be used by all students, regardless of the laboratory facilities available to them. Its experiments have been and continue to be successfully performed in regular microbiology laboratories. With the special LabPaq experiments can be performed at home by independent-study students or at small learning centers that do not have formal laboratories. Throughout the manual there are references about campus-based and independent study, but all of the information and references herein are equally relevant to both types of students.

Introduction

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Micro- and Small-Scale Experiments You may be among the growing number of students to take a full-credit microbiology course through independent study. If so, you can thank the development and perfection of micro- and small-scale techniques in microbiology experimentation. Experimentation is essential and fundamental to fully understanding the concepts of microbiology. In the past, microbiology courses required that all classes be conducted on a campus because experiments had to be performed in the campus laboratory. This was due in part to the potential hazards inherent in some traditional experimentation.

These elements of danger, plus increasing chemical and material costs and environmental concerns about chemical and biological material disposal, made high schools, colleges, and universities reexamine the traditional laboratory methods used to teach subjects such as chemistry and microbiology. Scientists began to scale down the quantities of chemicals used in their experiments and found that reaction results remained the same, even when very tiny amounts of chemicals were used. Institutions also discovered that student learning was not impaired by studying small- sized reactions.

Over time, more and more traditional chemistry and microbiology experiments were redesigned for micro- and small-scale techniques. One of the primary pioneers and most prominent contributors to micro- and small-scale experimentation is Dr. Hubert Alyea of Princeton University. He not only reformatted numerous experiments, he also designed many of the techniques and equipment used in micro- and small-scale chemistry and microbiology today.

With decreased hazards, costs, and disposal problems, micro- and small-scale experimentation techniques were quickly adapted for use in scholastic laboratories. As these techniques continued to be further refined it became possible to perform basic experiments in the classroom and eventually outside the classroom. This slow but steady progression of micro- and small-scale techniques makes it possible for independent study students to take a full-credit microbiology course since they can now perform experiments at home.

Introduction

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How to Study Microbiology Microbiology is not the easiest subject to learn, but neither is it the hardest. As in any other class, if you responsibly apply yourself, conscientiously read your text, and thoughtfully complete your assignments, you will learn the material. Here are some basic hints for effectively studying microbiology – or any other subject – either on or off campus.

Plan to Study: You must schedule a specific time and establish a specific place in which to seriously, without interruptions or distractions, devote yourself to your studies. Think of studying like you would think of a job, except that now your job is to learn. Jobs have specific times and places in which to get your work done, and studying should be no different. Just as television, friends, and other distractions are not permitted on a job; you should not permit them to interfere with your studies. You cannot learn when you are distracted. If you want to do something well, you must be serious about it. Only after you’ve finished your studies should you allow time for distractions.

get in the right Frame of Mind: Think positively about yourself and what you are doing. Give yourself a pat on the back for being a serious student and put yourself in a positive frame of mind to enjoy what you are about to learn. Then get to work! Organize any materials and equipment you will need in advance so you don’t have to interrupt your thoughts to find them later. Look over your syllabus and any other instructions to know exactly what your assignment is and what you need to do. Review in your mind what you have already learned. Is there anything that you aren’t sure about? Write it down as a formal question, then go back over previous materials to try to answer it yourself. If you haven’t figured out the answer after a reasonable amount of time and effort, move on. The question will develop inside your mind and the answer will probably present itself as you continue your studies. If not, at least the question is already written down so you can discuss it later with your instructor.

Be Active with the Material: Learning is reinforced by relevant activity. When studying feel free to talk to yourself, scribble notes, draw pictures, pace out a problem, tap out a formula, etc. The more active things you do with study materials, the better you will learn. Have highlighters, pencils, and note pads handy. Highlight important data, read it out loud, and make notes. If there is a concept you are having problems with, stand up and pace while you think it through. See the action taking place in your mind. Throughout your day try to recall things you have learned, incorporate them into your conversations, and teach them to friends. These activities will help to imprint the related information in your brain and move you from simple knowledge to true understanding of the subject matter.

Do the Work and Think about What you are Doing: Sure, there are times when you might get away with taking a shortcut in your studies, but in doing so you will probably shortchange yourself. The things we really learn are the things we discover ourselves. That is why we don’t learn as much from simple lectures or when someone gives us the answers. And when you have an assignment, don’t just go through the motions. Enjoy your work, think about what you are doing, be curious, examine your results, and consider the implications of your findings. These “critical thinking” techniques will improve and enrich your learning process. When you complete your assignments independently and thoroughly you will have gained knowledge and you will be proud of yourself.

Introduction

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How to Study Microbiology Independently There is no denying that learning through any method of independent study is a lot different than learning through classes held in traditional classrooms. A great deal of personal motivation and discipline is needed to succeed in a course of independent study where there are no instructors or fellow students to give you structure and feedback. But these problems are not insurmountable and meeting the challenges of independent study can provide a great deal of personal satisfaction. The key to successful independent study is in having a personal study plan and the personal discipline to stick to that plan.

Properly Use your learning Tools: The basic tools for telecourses, web courses and other distance-learning methods are often similar and normally consist of computer software or videos, textbooks, and study guides. Double check with your course administrator or syllabus to make sure you acquire all the materials you will need. These items are usually obtained from your campus bookstore, library, or via the Internet. Your area’s public and educational television channels may even broadcast course lectures and videos. If you choose to do your laboratory experimentation independently, you will need the special equipment and supplies described in this lab manual and contained in its companion LabPaq. The LabPaq can be purchased on the Internet at www. LabPaq.com.

For each study session, first work through the appropriate sections of your course materials. These basically serve as a substitute for classroom lectures and demonstrations. Take notes as you would in a regular classroom. Actively work with any computer and/or text materials, carefully review your study guide, and complete all related assignments. If you do not feel confident about the material covered, repeat these steps until you do. It’s a good idea to review your previous work before proceeding to a new section. This reinforces what you previously learned and prepares you to absorb new information. Experimentation is the very last thing done in each study session and it will only be really meaningful if you have first absorbed the text materials that it demonstrates.

Plan to Study: A regular microbiology course with a laboratory component will require you to spend around 15 hours a week studying and completing your assignments. Remember, microbiology is normally a 5-credit hour course! To really learn new material there is a generally accepted 3-to- 1 rule that states that at least 3 hours of class and study time are required each week for each hour of course credit taken. This rule applies equally to independent study and regular classroom courses. On campus, microbiology students are in class for 4 hours and in the laboratory for 2 to 3 hours each week. Then they still need at least 8 hours to read their text and complete assignments. Knowing approximately how much time you need will help you to formulate a study plan at the beginning of the course and then stick with it.

Schedule your Time Wisely: The more often you interact with study materials and call them to mind, the more likely you are to reinforce and retain the information. Thus, it is much better to study in several short blocks of time rather than in one long, mind-numbing session. Accordingly, you should schedule several study periods throughout the week, or better yet, study a little each day. Please do not try to do all of your study work on the weekends! You will just burn yourself out, you won’t really learn much, and you will probably end up feeling miserable about yourself and microbiology. Wise scheduling can prevent such unpleasantness and frustration.

Introduction

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Choose the Right Place for Your Home Laboratory If you are experimenting at home, the best place to perform your micro- and small-scale microbiology experiments is in an uncluttered room that has these important features:

● a door that can be closed to keep out pets and children

● a window or door that can be opened for fresh air ventilation and fume exhaust

● a source of running water for fire suppression and cleanup

● a counter or table-top work surface

● a heat source such as a stove top, hot dish, or Bunsen burner

The kitchen usually meets all these requirements, but you must make sure you clean your work area well both before and after experimentation. This will keep foodstuff from contaminating your experiment and your experiment materials from contaminating your food. Sometimes a bathroom makes a good laboratory, but it can be rather cramped and subject to a lot of interruptions. Review the “Basic Safety” section of this manual to help you select the best location for your home-lab and to make sure it is adequately equipped.

Introduction

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Organization of the Lab Manual Before proceeding with the experiments you need to know what is expected of you. To find out, please thoroughly read and understand all the various sections of this manual.

laboratory Notes: Like all serious scientists you will record formal notes detailing your activities, observations, and findings for each experiment. These notes will reinforce your learning experiences and knowledge of microbiology. Plus, they will give your instructional supervisor a basis for evaluating your work. The “Laboratory Notes” section of this manual explains exactly how your lab notes should be organized and prepared.

Required Equipment and Supplies: This manual also contains a list of the basic equipment and supplies needed to perform all the experiments. Students performing these experiments in a non-lab setting must obtain the “LabPaq” specifically designed to accompany this manual. It includes all the equipment, materials, and chemicals needed to perform these experiments, except for some items usually found in the average home or obtainable in local stores. At the beginning of each experiment there is a “Materials” section that states exactly which items the student provides and which items are found in the LabPaq. Review this list carefully to make sure you have all these items on hand before you begin the experiment. It is assumed that campus- based students will have all the needed equipment and supplies in their laboratories and that the instructors will supply required materials and chemicals in the concentrations indicated.

Laboratory Techniques: While these techniques primarily apply to full-scale experiments in formal laboratories, knowledge of them and their related equipment is helpful to the basic understanding of microbiology and may also be applicable to your work with micro- and small- scale experimentation.

Basic Safety and Micro-scale Safety reinforcement: The use of this lab manual and the LabPaq, plus authorization to perform their experiments, are expressly conditioned upon the user reading, understanding and agreeing to abide by all the safety rules and precautions noted. Additional terms authorizing use of the LabPaq are contained in its purchase agreement. These safety sections are relevant to both laboratory and non-laboratory experimentation. They describe potential hazards plus the basic safety equipment and safety procedures designed to avoid such hazards. The Basic Safety and Micro-scale Safety Reinforcement sections are the most important sections of this lab manual and should always be reviewed before starting each new experiment.

Experiments: All experimental materials and procedures are fully detailed in the laboratory manual for each experiment. Chemicals and supplies unique for a specific experiment are contained in a bag labeled with the experiment number.

Introduction

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How to Perform an Experiment Although each experiment is different, the process for preparing, performing, and recording all the experiments is essentially the same.

Review Basic Safety: Before beginning reread the safety sections, try to foresee potential hazards, and take appropriate steps to prevent problems.

Read through the Entire Experiment before You Start: Knowing what you are going to do before you do it will help you to be more effective and efficient.

Organize Your Work Space, Equipment, and Materials: It is hard to organize your thoughts in a disorganized environment. Assemble all required equipment and supplies before you begin working. These steps will also facilitate safety.

outline your lab Notes: Outline the information needed for your lab notes and set up required data tables. This makes it much easier to concentrate on your experiment. Then simply enter your observations and results as they occur.

Perform the Experiment According to Instructions: Follow exactly all directions in a step-by-step format. This is not the time to be creative. DO NOT attempt to improvise your own procedures!

Think About What you Are Doing: Stop and give yourself time to reflect on what has happened in your experiment. What changes occurred? Why? What do they mean? How do they relate to the real world? This step can be the most fun and often creates “light bulb” experiences of understanding.

Complete Your Lab Notes and Answer Required Questions: If you have properly followed all the above steps, this concluding step will be easy.

clean-up: Blot any minute quantities of unused chemicals with a paper towel or flush them down the sink with generous amounts of water. Discard waste in your normal trash. Always clean your equipment immediately after use or residue may harden and be difficult to remove later. Return equipment and supplies to their proper place, and if working at home with a LabPaq, store it out of the reach of children and pets.

Introduction

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Antibiotic Sensitivity 24 – 48 hrs. ahead 1 hour 24 – 72 hours 1 hour

EXPEriMENT 11:

Fomite Transmission None 1 – 2 hours 24 – 72 hours Less than 1 hour

EXPEriMENT 12:

Microbes in the Environment None 1 – 3 hours 24 – 72 hours Less than 1 hour

EXPEriMENT 13: 24 hour intervals

Fungi None Less than 1 hour Up to 1 week 2 – 3 hours

Estimated Time Requirements for Each Experiment Note: These estimates are provided to help you plan and schedule your time. They are given per individual lab performed separately and do not consider time and step savings possible when several labs are grouped together. Of course, these are only estimates and your actual time requirements may differ.

Experiment No. / Title Preparation Experimenting Incubation After Incubation

EXPEriMENT 1:

Observing Bacteria & Blood None 3 – 4 hours None None

EXPEriMENT 2:

Bacterial Morphology None 3 – 4 hours None None

EXPEriMENT 3:

Aseptic Techniques & Culturing Microbes None 1 – 2 hours 24 – 48 hours Less than 1 hour

EXPEriMENT 4:

Isolation of Individual Colonies None-use Exp. 3 cultures 3 – 4 hours 24 – 48 hours Less than 1 hour

EXPEriMENT 5: 30 minutes

Differential Staining 24 – 48 hours ahead 3 – 4 hours 24 – 48 hours None

EXPEriMENT 6:

Methyl Red 30 minutes

Voges-Proskauer Test 24 – 48 hours ahead Less than 1 hour 48 – 72 hours 1 hour

EXPEriMENT 7: 30 minutes

Motility Testing 24 – 48 hours ahead Less than 1 hour 24 – 48 hours Less than 1 hour

EXPEriMENT 8:

Carbohydrate 30 minutes

Fermentation Testing 24 – 48 hrs. ahead Less than 1 hour 12 – 24 hours Less than 1 hour

EXPEriMENT 9: 30 minutes

Osmosis 24 – 48 hrs. ahead Less than 1 hour 24 – 72 hours Less than 1 hour

EXPEriMENT 10: 30 minutes

Introduction

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laboratory Notes and lab reports Normally two basic records are compiled during and from scientific experimentation activities. The first record is Lab Notes which you will record as you perform your actual experiments. Entries into your lab notebook will be the basis for your second record, the Lab Report. The Lab Report formally summarizes the activities and findings of your experiment and is what is normally submitted for instructor grading.

Scientists keep track of their experimental procedures and results through lab notes that are recorded in a journal-type notebook as they work. In laboratories these notebooks are often read by colleagues such as directors and other scientists working on a project. In some cases scientific notebooks have become evidence in court cases. Thus, lab notes must be intelligible to others and include sufficient information so that the work performed can be replicated and so there can be no doubt about the honesty and reliability of the data and of the researcher.

Notebooks appropriate for data recording are bound and have numbered pages that cannot be removed. Entries normally include all of the scientist’s observations, actions, calculations, and conclusions related to each experiment. Data is never entered onto pieces of scratch paper to later be transferred, but rather is always entered directly into the notebook. When erroneous data is recorded, a light diagonal line is drawn neatly through the error, followed by a brief explanation as to why the data was voided. Information learned from an error is also recorded. Mistakes can often be more useful than successes, and knowledge gained from them is valuable to future experimentation.

As in campus-based science laboratories, independent-study students are normally expected to keep a complete scientific notebook of their work that may or may not be periodically reviewed by their instructor. Paperbound 5×7 notebooks of graph paper usually work well as science lab notebooks. Since it is not practical to send complete notebooks back and forth between instructors and students for each experiment, independent-study students usually prepare formal Lab Reports that are submitted to their instructors along with regular assignments via e-mail or fax.

Lab notes of experimental observations can be kept in many ways. Regardless of the procedure followed, the key question for deciding what kind of notes to keep is this: “Do I have a clear enough record so that I could pick up my lab notebook or read my Lab Report in a few months and still explain to myself or others exactly what I did?” Laboratory notes normally include these components:

Title: This should be the same title stated in the laboratory manual.

Purpose: Write a brief statement about what the experiment is designed to determine or demonstrate.

Procedure: Briefly summarize what you did in performing this exercise and what equipment was used. Do not simply copy the procedure statement from the lab manual.

Data Tables: Tables are an excellent way to organize your observational data. Where

Introduction

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applicable, the “Procedures” section of the experiment often advises a table format for data recording. Always prepare tables before experimenting so they will be ready to receive data as it is accumulated.

Observations: What did you observe, smell, hear, or otherwise measure? Usually, observations are most easily recorded in table form.

Questions: Questions are asked frequently throughout and at the end of exercises. They are designed to help you think critically about the exercise you just performed. Answer thoughtfully.

conclusions: What did you learn from the experiment? Your conclusions should be based on your observations during the exercise. Conclusions should be written in your best formal English, using complete sentences, paragraphs, and correct spelling.

Here are some general rules for keeping a lab notebook on your science experiments:

Leave the first two to four pages blank so you can later add a “Table of Contents” at the front of the notebook. Entries into the table of contents should include the experiment number and name plus the page number where it can be found.

● Your records should be neatly written.

● The notebook should not contain a complete lab report of your experiment. Rather, it should simply be a record of what you did, how you did it, and what your results were. Your records need to be complete enough so that any reasonably knowledgeable person familiar with the subject of your experiment, such as another student or your instructor, can read the entries, understand exactly what you did, and if necessary, repeat your experiment.

● Organize all numerical readings and measurements in appropriate data tables as in the sample Lab Report presented later.

● Always identify the units for each set of data you record (centimeters, kilograms, seconds, etc.).

● Always iden tify the equipment you are using so you can find or create it later if needed to recheck your work.

● It is an excellent idea to document important steps and observations of your experiments via digital photos and also to include yourself in these photos. Such photos within your Lab Report will document that you actually performed the experiment as well as what you observed.

● In general, it is better to record more rather than less data. Even details that may seem to have little bearing on the experiment you are doing (such as the time and the temperature when the data were taken and whether it varied during the observations) may turn out to be information that has great bearing on your future analysis of the results.

● If you have some reason to suspect that a particular data set may not be reliable (perhaps you had to make the read ing very hurriedly) make a note of that fact.

Introduction

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● Never erase a reading or data. If you think an entry in your notes is in error, draw a single line through it and note the correction, but do not scratch it out completely or erase it. You may later find that it was significant after all.

Although experimental results may be in considerable error, there is never a “wrong” result in an experi ment for even errors are important results to be considered. If your observations and measurements were carefully made, your result will be correct. Whatever happens in nature, includ ing the laboratory, cannot be wrong. Errors may have nothing to do with your investigation, or they may be mixed up with so many other events you did not expect that your report is not use- ful. Yet even errors and mistakes have merit and often lead to our greatest learning experiences. Thus, you must think carefully about the interpretation of all your results, including your errors.

Finally, the cardinal rule in a laboratory is to fully carry out all phases of your experiments instead of “dry-labbing” or taking shortcuts. The Greek scientist, Archytas, summed this up very well in 380 BCE:

In subjects of which one has no knowl edge one must obtain knowledge either by learning from someone else or by discover ing it for oneself. That which is learned, there- fore, comes from another and by outside help; that which is discovered comes by one’s own efforts and independently. To discover without seeking is difficult and rare, but if one seeks it is frequent and easy. If, however, one does not know how to seek, discovery is im possible.

Introduction

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Science lab report Format This guide covers the overall format that formal Lab Reports normally follow. Remember that the Lab Report should be self-contained so that anyone, including someone without a science background and without a lab manual, can read it and understand what was done and what was learned. Data and calculation tables have been provided for many of the labs in this manual and students are encouraged to use them. Computer spreadsheet programs such as Excel® can greatly facilitate the preparation of data tables and graphs. One website with additional information on preparing lab reports is: http://www.ncsu.edu/labwrite/. Remember, above average work is necessary to receive above average grades!

Lab Reports are expected to be word processed and to look organized and professional. They should be free of grammar, syntax, and spelling errors and be a respectable presentation of your work. Writing in the first person should be avoided as much as possible. Lab Reports should generally contain these sections:

● Title Page

● Section 1: Abstract, Experiment Description, Procedures, and Observations including photos, drawings, and data tables

● Section 2: Analysis including calculations, graphs, and error analysis

● Section 3: Discussion of Results

Each of the above three sections is discussed in greater detail below. They should be clearly distinguished from each other in the actual report. The presentation and organization skills developed by producing science Lab Reports will be beneficial to all potential career fields.

Title Page: This is the first page of the lab report and consists of:

a. Experiment number and/or title

b. Your name

c. The names of any lab partner(s)

d. The date and time the experiment was preformed

e. The location should be included if work was performed in the field

f. The course number

Introduction

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Section 1: Abstract, Experiment, and Observation Abstract: Even though the abstract appears at the beginning of the report, it is written last and inserted into the beginning. An abstract is a very concise description of the experiment’s objective, results, and conclusions. It should be no longer than a paragraph.

Experiment and Observation: Carefully, yet concisely, describe, in chronological order, what was done, what was observed, and what, if any, problems were encountered. Describe what field and laboratory techniques and equipment were employed to collect and analyze the data upon which the conclusions are based. Photos and graphic illustrations are usually inserted in this section. Graphics should be in .jpg or .gif format to minimize their electronic file size.

Show all work for any calculations performed. Every graph must have a title and its axes must be clearly labeled. Curves through data points this should be “best-fit curves,” which are smooth straight or curved lines that best represents the data, rather than a dot-to-dot connection of data points.

Include all data tables, photos, graphs, lists, sketches, etc. in an organized fashion. Include relevant symbols and units with data. Generally a sentence or two explaining how data was obtained is appropriate for each data table.

Note any anomalies observed or difficulties encountered in collecting data as these may affect the final results. Include information about any errors observed and what was learned from them. Be deliberate in recording the experimental procedures in detail. Your comments may also include any preliminary ideas you have on explaining the data or trends you see emerging.

Introduction

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Section 2: Analysis including Calculations, Graphs, and Error Analysis Generally, the questions at the end of each lab will act as a guide for preparing results and conclusions. This section is normally written in paragraph form and not more than one or two pages long. Additional considerations are:

● What is the connection between the experimental measurements taken and the final results and conclusions? How do your results relate to the real world?

● What were the results of observations and calculations?

● What trends were noticed?

● What is the theory or model behind the experiment preformed?

● Do the experimental results substantiate or refute the theory? Why? Be sure to refer specifically to the results you obtained!

● Were the results consistent with your original predictions of outcomes or were you forced to revise your thinking?

● Did “errors” such as environmental changes (wind, rain, etc.) or unplanned friction occur? If so, how did they affect the experiment?

● Did any “errors” occur due to the equipment used such as estimates being skewed due to a lack of sufficient measurement gradients on a beaker?

● What recommendations might improve the procedures and results?

Errors: In a single paragraph comment on the accuracy and precision of the apparatus and include a discussion of the experimental errors and an estimate of the error in your final result. Remember, “errors” are not “mistakes!” Errors arise because the apparatus and/or the environment inevitably fail to match the “ideal circumstances” assumed when deriving a theory or equations. The two principal sources or error are:

Physical phenomena: Elements in the environment may be similar to the phenomena being measured and thus may affect the measured quantity. Examples might include stray magnetic or electric fields or unaccounted for friction.

Limitations of the observer, the analysis, and/or the instruments: Examples are parallax error when reading a meter tape, the coarse scale of a graph, and the sensitivity of the instruments.

Examples of “mistakes” and “human errors” that are not acceptable scientific errors include:

a. Misuse of calculator (pushing the wrong button, misreading the display)

b. Misuse of equipment

c. Faulty equipment

d. Incorrectly assembled circuit or apparatus

Introduction

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Section 3: Discussion, Results, and Conclusions Discussion: The discussion section should be carefully organized and include consideration of the experiment’s results, interpretation of results, and uncertainty in results as further described below. This section is normally written in paragraph form and no more than one to two pages in length. Occasionally it will be more appropriate to organize various aspects of the discussion differently for different labs. Not all of the following questions will apply to every lab.

results

● What is the connection between your observations, measurements, and final results?

● What were the independent or dependent variables in the experiment?

● What were the results of your calculations?

● What trends were noticeable?

● How did the independent variables affect the dependent variables? For example, did an increase in a given independent variable result in an increase or decrease in the associated dependent variable?

Interpretation of Results

● What is the theory or model behind the experiment you performed?

● Do your experimental results substantiate or agree with the theory? Why or why not? Be sure to refer specifically to YOUR experimental results!

● Were these results consistent with your original beliefs or were you forced to re-evaluate your prior conceptions?

Uncertainty in results:

● How much did your results deviate from expected values?

● Are the deviations due to error or uncertainty in the experimental method or are they due to idealizations inherent in the theory, or are they due to both?

● If the deviations are due to experimental uncertainties can you think of ways to decrease the amount of uncertainty?

● If the deviations are due to idealizations in the theory what factors has the theory neglected to consider? In either case, consider whether your results display systematic or random deviations.

 
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